Bob
My two cents:
-32 scales make me nervous: They're harder to re-sell, and your string choices narrow down quite a bit (NO, you just can't cut off 34 strings)
-five-string, B-G, string spacing to match, OK
-the 'hang' you want would certainly imply a Rogue shape
-three purplehearts will do, it's extra work for two and one ebony
-bridge blocks I can live without
-I love the bird tailpiece, the Crown or Fan headstocks are classic, and the paint/clear jobs they do (20 coats?) are unreal.
-I like gold hardware, but you might spring for gold keys to match the regular brass hardware: Almost the same look, but less the expense of gold-plating everything.
-fingerboard inlays are up to you, though some match colored finishes terrifically.
-the bumblebee inlay, you're on your own.
-a flame laminate usually doesn't show on the edge, which is all you'd see
-I'd go with straight grain maple in the neck for strength and tameness
-I LOVE Val's shape; the 'K' is going to have to grow on me, as I'm old-school as far as their shapes.
-I like the Signature electronics: I don't need the quick change switches, and Ditto about the Anniversary stereo.
-Use 2 FatBoys or 2 AXY's. If you must mix them, put the FatBoy at the Bridge
-For the body, my choice is always a handsome maple over mahogany: For me this is always the best all around combination. Of your choices, Vermillion (in a piece suitably swirly and orangey) over a Mahogany core would give you the look of cocobolo at a LARGE savings, and I'm sure Mica could suggest a contrasting pin-stripe laminate between the two to set it off. See Stanley's cover of BASS PLAYER from last winter, that Vermillion SC he's holding is just too fine . . . and use the back with the same wood as your top for a great finished look.
-Use the standard brass logo, brass back doors. Or have the matching wood back doors done.
Well, you got a lot for two cents!
J o e y