so when I use Ch A in/out only I get the Input gain working and nothing else no other knobs on Ch A do anything nor the Hi/Band/Lo.
Plugging into Ch. B in/out works normally everything works as it should
If the switch was set to Stereo, then this suggests you have a problem with Ch A.
However, if Mono then I believe this would be normal - not how you are supposed to use the input/outputs in this case, but the behavior would not be surprising.
I assume you did this test in Stereo, but just want to be clear.
So ... when I hook it up in three way Channel Mixer mode as is usual for my situation I only get Ch A working.
I can run a Patch cord from ch. A out to ch. B in and get it running in Series mode. everything works that way.
Assuming the switch was in Mono here, both of these sound wrong and puzzling to me. The first comment seems to conflict with your earlier test, in that it now sounds like you have a problem with Ch B, rather than A. And to patch it into Series mode, the switch is supposed to be in Stereo (though I guess I don't know for sure it wouldn't work in Mono).
when I run it in Stereo in series mode, there is slight lift in volume and even the tone changes a bit
At least this part sounds normal. You can actually get more total gain, by applying one filter after the other, depending on what settings you use, and the tone will also likely change.
One of the best discussions I've seen about using Series mode is
here. any more advice is welcome
I think it's time to seek professional help :-) If I am understanding you correctly, it seems like there's some problem in how the signal gets routed (or not) from Ch A to B, which might be due to a problem with the switch, or perhaps some magic that happens internally that I don't really understand.
One other test you might try would be to take your preamp out of the picture. Plug the instrument into the front panel jack, run Ch B Out directly to your amp.
With the switch set to Mono, you should have a 3 channel mixer.
With the switch in Stereo, you could do either of two things. Use either Ch A or B Out (just one at a time) to your amp, and they should behave identically. Or, patch Ch A Out to Ch B In to run in Series mode, using Ch B Out to your amp.
Maybe this will somehow help to clarify where the problem is, but I certainly won't be able to tell you how to fix it. I'm pretty much out of ideas here.