If you move the nut so it butts up flush against the fretboard, is there a gap on the bottom of the nut? I guess I’m asking if the angle of the end of the board where it hits the headstock greater than 90 degrees? If so, I would figure out which position results in the intonation being closer to the fret lines. If it’s like in the pic, I’d just leave it alone. If the intonation is closer with the nut up against the board, and that created a gap at the bottom, I would craft a wooden shim to fill the gap. Or I would get a brass blank and fashion a custom fitting nut. I hope this makes sense. FWIW, the nut on my ‘76 Series guitar sits flush with the board end.
And, of course, I’d wait for some more advice, especially if Mica chimes in, before making any final decisions.
Bill, tgo