Dave,
It sounds like you may be on the way to a solution, but I just wanted to add a couple of things:
I don't think the phase of the signal feeding the tuner makes a difference here, since the tuner sees only a single input signal. Also, I'm not sure that attempting to flip the phase with a cable will work, or is a good idea. The crossover and full range outputs are single-ended, referenced to ground. A reverse wired cable will essentially short the output driver to ground through the input of the tuner. At best, you'll get no signal at the tuner. At worst, you could get no signal and a damaged output device. Someone please correct me if I'm wrong about this.
I'm wondering if your problem is related to the level or harmonic content of the signal feeding the tuner. You could see if the tuner behaves differently depending on your volume setting. Also , as Werner said, tuners like to see a simple signal, as pure as possible. Perhaps running the tuner post EQ (SF & F1-X) is freaking it out. Since you're already using the low pass output, experimenting with the crossover frequency might help.
- nate.
(Message edited by cntrabssn on October 16, 2004)